Uncharted Genes and Neurodevelopment in Autism

Previously undiscovered, a multitude of genes associated with neurodevelopmental disorders, such as autism, have been unveiled by a team of scientists, shedding light on their impact on human brain development, as published in the journal in Nature (1^✔ ✔Trusted Source
Assembloid CRISPR screens reveal impact of disease genes in human neurodevelopment

Go to source). Studies have implicated at least 500 genes in such disorders. However, scientists have no idea exactly how defects in most of these genes impair brain function.

The new findings, led by a team from Stanford University in the US, are likely to accelerate drug development for neurodevelopmental disorders.

There are two main classes of neurons in the cerebral cortex: excitatory and inhibitory. Excitatory neurons fire impulses that activate other neurons, while inhibitory neurons’ firing blocks other neurons from firing.

Inhibitory and excitatory neurons integrate to form circuits, shaping signaling activity in the brain.

Exploring the Hidden Influencers

In humans, as many as half of all cells in the cerebral cortex, the brain’s outermost and most recently evolved layer, are inhibitory. Scientists theorized that an imbalance in the number or function of inhibitory neurons compared with excitatory neurons might be at least partly responsible for autism spectrum disorder and epilepsy.

“If that’s true, you could find ways to alter the functional balance of these cells in the cortex as a therapeutic approach for these disorders,” said Sergiu Pasca, Professor of Psychiatry and Behavioral Sciences at the varsity.

But first, he wondered, how do you make sense of the enormous collection of genes that have been implicated in these conditions but whose impacts are largely unknown?

Advertisement

Does the existence of hundreds of genes associated with disease mean that there are hundreds of different types of neurodevelopmental disorders, each requiring a different remedy? Or might several different genes converge and lead to similar pathology, or some particular aspect of it?

“If it’s the latter, a cluster of gene defects that all produce a similar physiological deficit might be amenable to a single type of treatment,” Pasca said. To explore, the team used two cutting-edge technologies.

Unlocking the Secrets of Genes in Human Brain Growth

They paired cortical organoids, developed using human induced pluripotent stem (iPS) cells and a gene editing tool CRISPR, and tested 425 genes that have been linked to neurodevelopmental disorders.

Advertisement

Their test aimed to determine which ones interfere with the generation and migration of interneurons.

From those iPS cells, the researchers generated subpallial organoids. Some showed no fluorescence at all after 44 days in a dish, indicating their failure to generate interneurons.

By sequencing the genomes of these organoids, the researchers could tell which gene had been disabled by the CRISPR scissors, resulting in defective interneuron generation. They identified 13 such genes.

They also identified another 33 genes that, when missing, prevented interneurons from traveling to the cerebral cortex. All told, 46 genes, of the 425, appeared to affect the nerve cells that inhibit their neighbors, leading to an imbalance.

“The identification of 46 genes -- close to 10 percent of all known neurodevelopmental-disorder-associated genes -- whose dysfunction impairs interneuron development points to a subgroup of neurodevelopmental disorders that are characterized by inadequate inhibition of excitatory cortical neurons,” Pasca said.

Some of these genes have been previously uncharacterized, and their function unsuspected, Pasca said.

Reference:

1. Assembloid CRISPR screens reveal impact of disease genes in human neurodevelopment - (https://www.nature.com/articles/s41586-023-06564-w)

Source-IANS