New study attempts to identify bacterial indicator species of obesity and metabolic syndrome in adult and pediatric patients.

‘Scientists hope to identify bacterial indicator species that could serve as markers for obesity and metabolic syndrome in both pediatric and adult patients.’

The study, led by Tanveer Vasdev of the University of Iowa, analyzed 208 saliva and subgingival samples from periodontally, healthy, frequency-matched patients belonging to adult and pediatric obesity and MetS. 




Bacterial DNA isolated, V3-V4 region amplified, 16S sequencing performed on Illumina Miseq platform, annotated against HOMD database. Indicspecies, DESeq2 packages from R studio, and TukeyHSD were used to determine indicator species and significantly differentially abundant species between the groups.
A 2-fold log difference with a p-value less than 0.05 was set as a threshold for significance. Bacterial species that were identified in Indicspecies and that were identified as differentially significantly abundant by DESeq2 and Tukey HSD were determined to be ‘indicator species’ associated with MetS.
Tackling Metabolic Syndrome
The study identified potential indicator bacterial species that are associated with adult and pediatric MetS in the oral microbiome. Treponema denticola emerged as an indicator species in the pediatric MetS cohort in the salivary environment, while Prevotella scopos was identified as a potential indicator species of MetS in the salivary environment of our adult cohort.Acinetobacter johnsonii was identified as a potential indicator species of Adult MetS in the subgingival environment.
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Source-Eurekalert