In order to maintain the microflora in the gut, the immune system must be taught to tolerate foreign bacteria.
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‘Interaction between CD103-positive dendritic cells and regulatory T-cells is essential for the maintenance of the correct immunological equilibrium in the gut.’
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Hence the immune system must in some way be actively
prevented from attacking these bacteria although they do not fall into
the 'self' category. Ludwig-Maximilians-Universitaet (LMU) in Munich researches have now
shown how immune surveillance cells are educated to perform this task. 
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A German-Italian research collaboration has now uncovered one mechanism that helps to maintain this equilibrium in the gut. The project was led by Professor Thomas Brocker, Director of the Institute for Immunology at LMU, and the researchers report their findings in Nature Communications, an open-access member of the Nature family of science journals.
So-called dendritic cells (DCs) play a key part in maintaining this vital balance. DCs have two quite distinct physiological roles: In cases of infection they are essential for the activation of an immune response, but they are also involved in promoting immunological tolerance, i.e. they are capable of actively suppressing the immune response. In this sense, DCs act both as warriors and as diplomats.
In the latter guise they stimulate what are called induced regulatory T-cells (iTregs), which control the development of immunological tolerance and inhibit the activation of the immune system. In order to trigger tolerance vis-à-vis the gut microflora, DCs in the gut epithelium recognize and internalize microbial proteins and migrate to the lymph nodes that are associated with the intestine. On the way, the bacterial proteins are processed into small fragments.
These tags are then displayed on the surface of the DCs in association with specific binding proteins that are recognized by regulatory T-cells. This interaction in turn instructs the iTregs to suppress immune responses against the proteins in which these segments occur. "We believe that these iTregs are specific for the proteins produced by natural gut bacteria," says Brocker.
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The researchers demonstrated the effects of this transition in an animal model. Mice in which the CD40 signaling relay was permanently activated developed severe colitis, but showed no other symptoms. These dendritic cells can still migrate from the gut epithelium to the lymph nodes. However, once there, they undergo programmed cell death (apoptosis) and therefore cannot alert the regulatory T-cells to ensure the maintenance of immunological tolerance of proteins derived from the gut microflora. As a result, a generalized immune response is activated, and T-lymphocytes migrate to the gut epithelium where they induce inflammation.
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Source-Eurekalert